Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 AC004264.1-201ENST00000608354 794 ntBASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXP3Q9BZS1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 MMP23A-201ENST00000234610 1017 ntBASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 AP002982.1-201ENST00000492365 877 ntBASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 AC073195.1-201ENST00000607241 877 ntBASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXP3Q9BZS1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 KRT8P45-201ENST00000414328 1447 ntBASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 KRT8P3-201ENST00000519669 1449 ntBASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXP3Q9BZS1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXP3Q9BZS1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXP3Q9BZS1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.14■□□□□ 0.66
FOXP3Q9BZS1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXP3Q9BZS1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXP3Q9BZS1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms