Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF34Q969K3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF34Q969K3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF34Q969K3 AC034236.2-201ENST00000606662 1610 ntBASIC19.4■□□□□ 0.7
RNF34Q969K3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.39■□□□□ 0.7
RNF34Q969K3 Z98044.1-201ENST00000632503 1764 ntBASIC19.39■□□□□ 0.7
RNF34Q969K3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF34Q969K3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF34Q969K3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.39■□□□□ 0.69
RNF34Q969K3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF34Q969K3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF34Q969K3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF34Q969K3 COX11P1-201ENST00000489116 835 ntBASIC19.39■□□□□ 0.69
RNF34Q969K3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
RNF34Q969K3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF34Q969K3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RNF34Q969K3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF34Q969K3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF34Q969K3 AC073508.3-201ENST00000619697 1419 ntBASIC19.39■□□□□ 0.69
RNF34Q969K3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF34Q969K3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RNF34Q969K3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF34Q969K3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF34Q969K3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF34Q969K3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF34Q969K3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF34Q969K3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.38■□□□□ 0.69
RNF34Q969K3 KRT18P23-201ENST00000435622 1283 ntBASIC19.38■□□□□ 0.69
RNF34Q969K3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF34Q969K3 TNXA-203ENST00000507684 2038 ntBASIC19.38■□□□□ 0.69
RNF34Q969K3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF34Q969K3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF34Q969K3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RNF34Q969K3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF34Q969K3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RNF34Q969K3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF34Q969K3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF34Q969K3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF34Q969K3 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.37■□□□□ 0.69
RNF34Q969K3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF34Q969K3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF34Q969K3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.37■□□□□ 0.69
RNF34Q969K3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF34Q969K3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF34Q969K3 NEK4P2-201ENST00000580004 1012 ntBASIC19.37■□□□□ 0.69
RNF34Q969K3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RNF34Q969K3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF34Q969K3 AC139887.4-201ENST00000607877 719 ntBASIC19.37■□□□□ 0.69
RNF34Q969K3 AL023973.1-201ENST00000624619 620 ntBASIC19.37■□□□□ 0.69
RNF34Q969K3 AC112497.1-201ENST00000624824 639 ntBASIC19.37■□□□□ 0.69
RNF34Q969K3 AL031432.5-201ENST00000641059 760 ntBASIC19.37■□□□□ 0.69
RNF34Q969K3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF34Q969K3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF34Q969K3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF34Q969K3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF34Q969K3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF34Q969K3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF34Q969K3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms