Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 AC112907.2-201ENST00000448639 330 ntBASIC17.49■□□□□ 0.39
TM9SF4Q92544 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 ZNF444P1-201ENST00000559497 298 ntBASIC17.49■□□□□ 0.39
TM9SF4Q92544 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 AC116407.4-201ENST00000623319 1061 ntBASIC17.49■□□□□ 0.39
TM9SF4Q92544 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.49■□□□□ 0.39
TM9SF4Q92544 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM9SF4Q92544 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 AL161938.1-201ENST00000569833 2180 ntBASIC17.48■□□□□ 0.39
TM9SF4Q92544 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 AC005332.8-201ENST00000622750 2735 ntBASIC17.48■□□□□ 0.39
TM9SF4Q92544 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 HCG4P8-203ENST00000443049 980 ntBASIC17.48■□□□□ 0.39
TM9SF4Q92544 AC034232.1-201ENST00000506026 1064 ntBASIC17.48■□□□□ 0.39
TM9SF4Q92544 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.48■□□□□ 0.39
TM9SF4Q92544 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.48■□□□□ 0.39
TM9SF4Q92544 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM9SF4Q92544 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 TSPY21P-201ENST00000433481 731 ntBASIC17.47■□□□□ 0.39
TM9SF4Q92544 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.47■□□□□ 0.39
TM9SF4Q92544 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TM9SF4Q92544 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TM9SF4Q92544 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF4Q92544 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF4Q92544 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TM9SF4Q92544 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms