Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 ANKRD20A8P-203ENST00000641373 517 ntBASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CASKIN1Q8WXD9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.2
CASKIN1Q8WXD9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CASKIN1Q8WXD9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CASKIN1Q8WXD9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.76■■■□□ 2.2
CASKIN1Q8WXD9 MYLKP1-201ENST00000509077 1580 ntBASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 AL121912.1-201ENST00000603683 238 ntBASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CASKIN1Q8WXD9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 TP73-AS1-207ENST00000624167 988 ntBASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC28.75■■■□□ 2.19
CASKIN1Q8WXD9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CASKIN1Q8WXD9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 MRPL3P1-201ENST00000400109 1033 ntBASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC28.73■■■□□ 2.19
CASKIN1Q8WXD9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 AL499627.1-201ENST00000569373 2188 ntBASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 AC112777.1-201ENST00000540175 1423 ntBASIC28.72■■■□□ 2.19
CASKIN1Q8WXD9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 AC008687.5-201ENST00000593746 558 ntBASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 AC114341.1-201ENST00000618070 349 ntBASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CASKIN1Q8WXD9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CASKIN1Q8WXD9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CASKIN1Q8WXD9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CASKIN1Q8WXD9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CASKIN1Q8WXD9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CASKIN1Q8WXD9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC28.7■■■□□ 2.19
CASKIN1Q8WXD9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms