Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 HLA-A-209ENST00000638375 975 ntBASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
CKAP2Q8WWK9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 BX276092.2-201ENST00000417668 665 ntBASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 AL121829.2-201ENST00000620908 328 ntBASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 AL096828.2-201ENST00000567259 1965 ntBASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 MYLKP1-201ENST00000509077 1580 ntBASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CKAP2Q8WWK9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 AC022517.1-201ENST00000592429 346 ntBASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CKAP2Q8WWK9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms