Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.51■□□□□ 0.55
RAB3IL1Q8TBN0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 LINC00896-202ENST00000609602 2128 ntBASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 HLA-B-256ENST00000639848 1089 ntBASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAB3IL1Q8TBN0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AC092118.2-201ENST00000613495 667 ntBASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AC120498.8-201ENST00000614275 531 ntBASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AC093677.2-201ENST00000600169 1863 ntBASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AL499627.1-201ENST00000569373 2188 ntBASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 AC138028.4-201ENST00000564984 1845 ntBASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 KRT8P45-201ENST00000414328 1447 ntBASIC18.49■□□□□ 0.55
RAB3IL1Q8TBN0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 AC092368.3-202ENST00000574180 1591 ntBASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 PKD1P5-201ENST00000532415 10291 ntBASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 MIR663A-201ENST00000385250 93 ntBASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 AC091874.3-201ENST00000512672 1195 ntBASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
RAB3IL1Q8TBN0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms