Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 AC073592.3-201ENST00000625118 1834 ntBASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE9Q8IYJ1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 KRT8P45-201ENST00000414328 1447 ntBASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 AC093827.2-201ENST00000512654 315 ntBASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE9Q8IYJ1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 AC112777.1-201ENST00000540175 1423 ntBASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 AL023803.3-201ENST00000615559 522 ntBASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE9Q8IYJ1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.33■□□□□ 0.53
CPNE9Q8IYJ1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CPNE9Q8IYJ1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE9Q8IYJ1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE9Q8IYJ1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE9Q8IYJ1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE9Q8IYJ1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 MIR564-202ENST00000385049 94 ntBASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 AP003041.3-201ENST00000527151 707 ntBASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 MYC-208ENST00000641036 567 ntBASIC18.33■□□□□ 0.52
CPNE9Q8IYJ1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms