Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL6Q6ICC9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL6Q6ICC9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.73■□□□□ 0.27
RTL6Q6ICC9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL6Q6ICC9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL6Q6ICC9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTL6Q6ICC9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RTL6Q6ICC9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.72■□□□□ 0.27
RTL6Q6ICC9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTL6Q6ICC9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 AL032819.2-201ENST00000624543 2162 ntBASIC16.71■□□□□ 0.27
RTL6Q6ICC9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 AL645929.1-201ENST00000420084 975 ntBASIC16.71■□□□□ 0.27
RTL6Q6ICC9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.71■□□□□ 0.27
RTL6Q6ICC9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 AC112497.1-201ENST00000624824 639 ntBASIC16.71■□□□□ 0.27
RTL6Q6ICC9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.71■□□□□ 0.27
RTL6Q6ICC9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 AL512353.2-201ENST00000448759 1962 ntBASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 ATP5G2P1-201ENST00000433580 426 ntBASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL6Q6ICC9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms