Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 AC092666.2-201ENST00000613287 246 ntBASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LCN1P1Q5VSP4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 AL109923.1-201ENST00000618799 583 ntBASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 KRT8P41-201ENST00000533985 1514 ntBASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 AC099398.1-201ENST00000567919 2776 ntBASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.78■□□□□ 0.28
LCN1P1Q5VSP4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LCN1P1Q5VSP4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.77■□□□□ 0.27
LCN1P1Q5VSP4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 MTMR9LP-203ENST00000426597 1545 ntBASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LCN1P1Q5VSP4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms