Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP9P49458 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SRP9P49458 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP9P49458 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
SRP9P49458 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP9P49458 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.47■□□□□ 0.23
SRP9P49458 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 AC008764.6-201ENST00000595909 2069 ntBASIC16.47■□□□□ 0.23
SRP9P49458 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SRP9P49458 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.47■□□□□ 0.23
SRP9P49458 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SRP9P49458 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SRP9P49458 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SRP9P49458 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.46■□□□□ 0.23
SRP9P49458 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.46■□□□□ 0.23
SRP9P49458 PRORSD1P-202ENST00000563365 2154 ntBASIC16.46■□□□□ 0.23
SRP9P49458 ANO7L1-203ENST00000602586 1720 ntBASIC16.46■□□□□ 0.23
SRP9P49458 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP9P49458 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.46■□□□□ 0.23
SRP9P49458 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SRP9P49458 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP9P49458 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.46■□□□□ 0.23
SRP9P49458 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP9P49458 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.46■□□□□ 0.23
SRP9P49458 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.46■□□□□ 0.23
SRP9P49458 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SRP9P49458 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SRP9P49458 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SRP9P49458 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.46■□□□□ 0.22
SRP9P49458 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SRP9P49458 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SRP9P49458 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.46■□□□□ 0.22
SRP9P49458 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SRP9P49458 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.45■□□□□ 0.22
SRP9P49458 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.45■□□□□ 0.22
SRP9P49458 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.45■□□□□ 0.22
SRP9P49458 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SRP9P49458 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.45■□□□□ 0.22
SRP9P49458 AC233702.5-201ENST00000584107 538 ntBASIC16.45■□□□□ 0.22
SRP9P49458 AL445675.2-201ENST00000620291 557 ntBASIC16.45■□□□□ 0.22
SRP9P49458 AC131212.4-201ENST00000623606 975 ntBASIC16.45■□□□□ 0.22
SRP9P49458 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SRP9P49458 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SRP9P49458 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.45■□□□□ 0.22
SRP9P49458 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.45■□□□□ 0.22
SRP9P49458 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SRP9P49458 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 ESPNP-201ENST00000270691 2015 ntBASIC16.45■□□□□ 0.22
SRP9P49458 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.45■□□□□ 0.22
SRP9P49458 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SRP9P49458 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.44■□□□□ 0.22
SRP9P49458 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SRP9P49458 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SRP9P49458 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SRP9P49458 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms