Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCP4P48539 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PCP4P48539 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PCP4P48539 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 AC005224.4-201ENST00000583262 1652 ntBASIC12.78□□□□□ -0.36
PCP4P48539 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 AL356585.2-201ENST00000625078 2396 ntBASIC12.78□□□□□ -0.36
PCP4P48539 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.78□□□□□ -0.36
PCP4P48539 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PCP4P48539 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PCP4P48539 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.77□□□□□ -0.36
PCP4P48539 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PCP4P48539 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
PCP4P48539 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.77□□□□□ -0.36
PCP4P48539 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.77□□□□□ -0.36
PCP4P48539 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.77□□□□□ -0.37
PCP4P48539 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 Z82170.1-201ENST00000625081 3192 ntBASIC12.77□□□□□ -0.37
PCP4P48539 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.77□□□□□ -0.37
PCP4P48539 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
PCP4P48539 DYM-203ENST00000442713 2147 ntTSL 2 BASIC12.77□□□□□ -0.37
PCP4P48539 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.77□□□□□ -0.37
PCP4P48539 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PCP4P48539 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
PCP4P48539 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
PCP4P48539 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PCP4P48539 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
PCP4P48539 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.76□□□□□ -0.37
PCP4P48539 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PCP4P48539 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.76□□□□□ -0.37
PCP4P48539 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.76□□□□□ -0.37
PCP4P48539 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.76□□□□□ -0.37
PCP4P48539 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
PCP4P48539 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.76□□□□□ -0.37
PCP4P48539 DNM1P41-201ENST00000623634 3350 ntBASIC12.76□□□□□ -0.37
PCP4P48539 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
PCP4P48539 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 AC073347.1-201ENST00000421633 2643 ntBASIC12.76□□□□□ -0.37
PCP4P48539 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PCP4P48539 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms