Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC005082.1-201ENST00000413042 2259 ntBASIC16.97■□□□□ 0.31
RFC3P40938 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC3P40938 AC069148.1-201ENST00000608741 768 ntBASIC16.97■□□□□ 0.31
RFC3P40938 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFC3P40938 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC3P40938 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC3P40938 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFC3P40938 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 AL645929.1-201ENST00000420084 975 ntBASIC16.96■□□□□ 0.31
RFC3P40938 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFC3P40938 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.96■□□□□ 0.31
RFC3P40938 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 AC079602.3-201ENST00000623931 403 ntBASIC16.96■□□□□ 0.31
RFC3P40938 KRT8P32-201ENST00000512863 1461 ntBASIC16.96■□□□□ 0.31
RFC3P40938 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC3P40938 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC3P40938 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFC3P40938 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFC3P40938 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.96■□□□□ 0.3
RFC3P40938 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.96■□□□□ 0.3
RFC3P40938 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RFC3P40938 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 AC116562.4-201ENST00000641316 2276 ntBASIC16.95■□□□□ 0.3
RFC3P40938 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC3P40938 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC3P40938 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RFC3P40938 HCG4P8-203ENST00000443049 980 ntBASIC16.95■□□□□ 0.3
RFC3P40938 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC3P40938 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC3P40938 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC3P40938 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.95■□□□□ 0.3
RFC3P40938 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.95■□□□□ 0.3
RFC3P40938 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.95■□□□□ 0.3
RFC3P40938 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.95■□□□□ 0.3
RFC3P40938 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC3P40938 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RFC3P40938 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC3P40938 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC3P40938 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.94■□□□□ 0.3
RFC3P40938 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.94■□□□□ 0.3
RFC3P40938 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RFC3P40938 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFC3P40938 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.94■□□□□ 0.3
RFC3P40938 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.94■□□□□ 0.3
RFC3P40938 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms