Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTNNA1P35221 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 KRT8P45-201ENST00000414328 1447 ntBASIC19.61■□□□□ 0.73
CTNNA1P35221 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CTNNA1P35221 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNNA1P35221 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.61■□□□□ 0.73
CTNNA1P35221 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.61■□□□□ 0.73
CTNNA1P35221 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CTNNA1P35221 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.61■□□□□ 0.73
CTNNA1P35221 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.61■□□□□ 0.73
CTNNA1P35221 AC026271.3-201ENST00000571884 352 ntBASIC19.61■□□□□ 0.73
CTNNA1P35221 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 MYC-208ENST00000641036 567 ntBASIC19.61■□□□□ 0.73
CTNNA1P35221 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTNNA1P35221 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
CTNNA1P35221 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.61■□□□□ 0.73
CTNNA1P35221 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNNA1P35221 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.61■□□□□ 0.73
CTNNA1P35221 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.61■□□□□ 0.73
CTNNA1P35221 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 AL353807.1-201ENST00000427475 662 ntBASIC19.6■□□□□ 0.73
CTNNA1P35221 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.6■□□□□ 0.73
CTNNA1P35221 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CTNNA1P35221 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.6■□□□□ 0.73
CTNNA1P35221 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTNNA1P35221 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTNNA1P35221 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTNNA1P35221 KRT16P1-201ENST00000399124 1418 ntBASIC19.59■□□□□ 0.73
CTNNA1P35221 AC112777.1-201ENST00000540175 1423 ntBASIC19.59■□□□□ 0.73
CTNNA1P35221 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CTNNA1P35221 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.59■□□□□ 0.73
CTNNA1P35221 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.59■□□□□ 0.73
CTNNA1P35221 CKBP1-201ENST00000565489 1086 ntBASIC19.59■□□□□ 0.73
CTNNA1P35221 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CTNNA1P35221 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CTNNA1P35221 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTNNA1P35221 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CTNNA1P35221 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CTNNA1P35221 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.58■□□□□ 0.73
CTNNA1P35221 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CTNNA1P35221 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CTNNA1P35221 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
CTNNA1P35221 AC128676.1-201ENST00000454392 318 ntBASIC19.58■□□□□ 0.72
CTNNA1P35221 AC008040.2-201ENST00000461049 708 ntBASIC19.58■□□□□ 0.72
CTNNA1P35221 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.58■□□□□ 0.72
CTNNA1P35221 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CTNNA1P35221 AC011298.2-201ENST00000617989 482 ntBASIC19.58■□□□□ 0.72
CTNNA1P35221 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.58■□□□□ 0.72
CTNNA1P35221 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.58■□□□□ 0.72
CTNNA1P35221 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.58■□□□□ 0.72
CTNNA1P35221 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CTNNA1P35221 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms