Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.24■□□□□ 0.35
NR4A1P22736 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR4A1P22736 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NR4A1P22736 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.23■□□□□ 0.35
NR4A1P22736 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.23■□□□□ 0.35
NR4A1P22736 PRORSD1P-201ENST00000295112 541 ntBASIC17.23■□□□□ 0.35
NR4A1P22736 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.23■□□□□ 0.35
NR4A1P22736 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.23■□□□□ 0.35
NR4A1P22736 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.23■□□□□ 0.35
NR4A1P22736 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
NR4A1P22736 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.23■□□□□ 0.35
NR4A1P22736 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR4A1P22736 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.22■□□□□ 0.35
NR4A1P22736 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.22■□□□□ 0.35
NR4A1P22736 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.22■□□□□ 0.35
NR4A1P22736 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NR4A1P22736 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.22■□□□□ 0.35
NR4A1P22736 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
NR4A1P22736 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.22■□□□□ 0.35
NR4A1P22736 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.22■□□□□ 0.35
NR4A1P22736 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.22■□□□□ 0.35
NR4A1P22736 AC069544.1-201ENST00000609399 999 ntBASIC17.22■□□□□ 0.35
NR4A1P22736 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.22■□□□□ 0.35
NR4A1P22736 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.22■□□□□ 0.35
NR4A1P22736 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR4A1P22736 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.21■□□□□ 0.35
NR4A1P22736 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR4A1P22736 AC073592.3-201ENST00000625118 1834 ntBASIC17.21■□□□□ 0.35
NR4A1P22736 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NR4A1P22736 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR4A1P22736 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR4A1P22736 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.21■□□□□ 0.35
NR4A1P22736 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.21■□□□□ 0.35
NR4A1P22736 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.21■□□□□ 0.35
NR4A1P22736 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR4A1P22736 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR4A1P22736 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.21■□□□□ 0.35
NR4A1P22736 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.21■□□□□ 0.35
NR4A1P22736 RPS2P52-201ENST00000469610 820 ntBASIC17.21■□□□□ 0.35
NR4A1P22736 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
NR4A1P22736 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.21■□□□□ 0.35
NR4A1P22736 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR4A1P22736 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms