Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
IFNA1P01562 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 AL136116.3-201ENST00000402907 1138 ntBASIC14.69□□□□□ -0.06
IFNA1P01562 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 AL356441.2-201ENST00000443009 864 ntBASIC14.69□□□□□ -0.06
IFNA1P01562 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.69□□□□□ -0.06
IFNA1P01562 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.69□□□□□ -0.06
IFNA1P01562 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.69□□□□□ -0.06
IFNA1P01562 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.69□□□□□ -0.06
IFNA1P01562 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.69□□□□□ -0.06
IFNA1P01562 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
IFNA1P01562 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
IFNA1P01562 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.68□□□□□ -0.06
IFNA1P01562 AL162412.1-201ENST00000567129 965 ntBASIC14.68□□□□□ -0.06
IFNA1P01562 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.68□□□□□ -0.06
IFNA1P01562 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.68□□□□□ -0.06
IFNA1P01562 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.68□□□□□ -0.06
IFNA1P01562 AC100791.3-201ENST00000617619 330 ntBASIC14.68□□□□□ -0.06
IFNA1P01562 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
IFNA1P01562 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
IFNA1P01562 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.68□□□□□ -0.06
IFNA1P01562 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
IFNA1P01562 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.67□□□□□ -0.06
IFNA1P01562 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
IFNA1P01562 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms