Protein–RNA interactions for Protein: O60337

MARCH6, E3 ubiquitin-protein ligase MARCH6, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH6O60337 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MARCH6O60337 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MARCH6O60337 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.15■□□□□ 0.98
MARCH6O60337 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.15■□□□□ 0.98
MARCH6O60337 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MARCH6O60337 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MARCH6O60337 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.14■□□□□ 0.98
MARCH6O60337 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.14■□□□□ 0.98
MARCH6O60337 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MARCH6O60337 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MARCH6O60337 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MARCH6O60337 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.14■□□□□ 0.98
MARCH6O60337 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MARCH6O60337 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 MIR564-202ENST00000385049 94 ntBASIC21.14■□□□□ 0.97
MARCH6O60337 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
MARCH6O60337 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.14■□□□□ 0.97
MARCH6O60337 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.14■□□□□ 0.97
MARCH6O60337 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MARCH6O60337 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.14■□□□□ 0.97
MARCH6O60337 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.14■□□□□ 0.97
MARCH6O60337 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
MARCH6O60337 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MARCH6O60337 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
MARCH6O60337 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
MARCH6O60337 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
MARCH6O60337 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
MARCH6O60337 KRT18P57-201ENST00000443599 1254 ntBASIC21.13■□□□□ 0.97
MARCH6O60337 AC009947.2-201ENST00000444014 672 ntBASIC21.13■□□□□ 0.97
MARCH6O60337 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.13■□□□□ 0.97
MARCH6O60337 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC21.13■□□□□ 0.97
MARCH6O60337 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 MTMR9LP-203ENST00000426597 1545 ntBASIC21.13■□□□□ 0.97
MARCH6O60337 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
MARCH6O60337 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.13■□□□□ 0.97
MARCH6O60337 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
MARCH6O60337 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MARCH6O60337 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MARCH6O60337 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 AC004408.2-201ENST00000623613 2777 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 TERF1P1-201ENST00000311003 1181 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.12■□□□□ 0.97
MARCH6O60337 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.12■□□□□ 0.97
MARCH6O60337 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
MARCH6O60337 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.12■□□□□ 0.97
MARCH6O60337 WWOX-216ENST00000569818 525 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 AC140113.3-201ENST00000605663 199 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 AC141257.4-201ENST00000634557 245 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 AC136944.6-201ENST00000634818 245 ntBASIC21.12■□□□□ 0.97
MARCH6O60337 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
MARCH6O60337 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.12■□□□□ 0.97
MARCH6O60337 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.12■□□□□ 0.97
MARCH6O60337 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.12■□□□□ 0.97
MARCH6O60337 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.12■□□□□ 0.97
MARCH6O60337 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MARCH6O60337 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.11■□□□□ 0.97
MARCH6O60337 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MARCH6O60337 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
MARCH6O60337 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MARCH6O60337 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.11■□□□□ 0.97
MARCH6O60337 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.11■□□□□ 0.97
MARCH6O60337 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MARCH6O60337 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MARCH6O60337 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
MARCH6O60337 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MARCH6O60337 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms