Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 AC005521.1-201ENST00000393351 872 ntBASIC20.23■□□□□ 0.83
TGFB1I1O43294 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TGFB1I1O43294 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TGFB1I1O43294 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.22■□□□□ 0.83
TGFB1I1O43294 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.22■□□□□ 0.83
TGFB1I1O43294 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 ESPNP-201ENST00000270691 2015 ntBASIC20.22■□□□□ 0.83
TGFB1I1O43294 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.22■□□□□ 0.83
TGFB1I1O43294 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TGFB1I1O43294 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 AL137013.1-201ENST00000432946 1228 ntBASIC20.21■□□□□ 0.83
TGFB1I1O43294 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 AC010240.3-201ENST00000607688 395 ntBASIC20.21■□□□□ 0.83
TGFB1I1O43294 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.21■□□□□ 0.83
TGFB1I1O43294 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TGFB1I1O43294 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 MIR3180-4-201ENST00000582223 153 ntBASIC20.2■□□□□ 0.82
TGFB1I1O43294 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.2■□□□□ 0.82
TGFB1I1O43294 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TGFB1I1O43294 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms