Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RRP8O43159 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RRP8O43159 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.41■□□□□ 0.38
RRP8O43159 ZNF815P-204ENST00000434898 1737 ntBASIC17.41■□□□□ 0.38
RRP8O43159 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 AL162377.1-201ENST00000618844 1793 ntBASIC17.4■□□□□ 0.38
RRP8O43159 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RRP8O43159 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.4■□□□□ 0.38
RRP8O43159 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RRP8O43159 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RRP8O43159 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 AC098831.1-202ENST00000438821 336 ntBASIC17.4■□□□□ 0.38
RRP8O43159 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.4■□□□□ 0.38
RRP8O43159 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.4■□□□□ 0.38
RRP8O43159 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.4■□□□□ 0.38
RRP8O43159 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.4■□□□□ 0.38
RRP8O43159 MIR5100-201ENST00000579544 119 ntBASIC17.4■□□□□ 0.38
RRP8O43159 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.4■□□□□ 0.38
RRP8O43159 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.4■□□□□ 0.38
RRP8O43159 AC024563.2-201ENST00000603282 481 ntBASIC17.4■□□□□ 0.38
RRP8O43159 AC140113.2-201ENST00000604370 208 ntBASIC17.4■□□□□ 0.38
RRP8O43159 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.4■□□□□ 0.38
RRP8O43159 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RRP8O43159 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RRP8O43159 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RRP8O43159 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RRP8O43159 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RRP8O43159 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RRP8O43159 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
RRP8O43159 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RRP8O43159 MIR3687-2-201ENST00000577708 61 ntBASIC17.39■□□□□ 0.37
RRP8O43159 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.39■□□□□ 0.37
RRP8O43159 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.39■□□□□ 0.37
RRP8O43159 MIR3687-1-201ENST00000614492 61 ntBASIC17.39■□□□□ 0.37
RRP8O43159 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.39■□□□□ 0.37
RRP8O43159 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RRP8O43159 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
RRP8O43159 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RRP8O43159 AL109659.2-201ENST00000606809 1674 ntBASIC17.39■□□□□ 0.37
RRP8O43159 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
RRP8O43159 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RRP8O43159 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.38■□□□□ 0.37
RRP8O43159 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.38■□□□□ 0.37
RRP8O43159 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.38■□□□□ 0.37
RRP8O43159 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.38■□□□□ 0.37
RRP8O43159 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.38■□□□□ 0.37
RRP8O43159 MIR3180-4-201ENST00000582223 153 ntBASIC17.38■□□□□ 0.37
RRP8O43159 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.38■□□□□ 0.37
RRP8O43159 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.38■□□□□ 0.37
RRP8O43159 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RRP8O43159 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RRP8O43159 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms