Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 PPP1R14BP2-201ENST00000426284 444 ntBASIC12.71□□□□□ -0.37
NDUFA1O15239 GATS-209ENST00000454084 1030 ntTSL 3 BASIC12.71□□□□□ -0.37
NDUFA1O15239 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.71□□□□□ -0.37
NDUFA1O15239 PNMA6B-201ENST00000538162 1200 ntBASIC12.71□□□□□ -0.37
NDUFA1O15239 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFA1O15239 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.71□□□□□ -0.37
NDUFA1O15239 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.71□□□□□ -0.37
NDUFA1O15239 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFA1O15239 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFA1O15239 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
NDUFA1O15239 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFA1O15239 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
NDUFA1O15239 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
NDUFA1O15239 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFA1O15239 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFA1O15239 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFA1O15239 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFA1O15239 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
NDUFA1O15239 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NDUFA1O15239 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.7□□□□□ -0.38
NDUFA1O15239 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.7□□□□□ -0.38
NDUFA1O15239 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.7□□□□□ -0.38
NDUFA1O15239 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.7□□□□□ -0.38
NDUFA1O15239 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.7□□□□□ -0.38
NDUFA1O15239 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
NDUFA1O15239 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 AC012317.2-201ENST00000623305 2251 ntBASIC12.7□□□□□ -0.38
NDUFA1O15239 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
NDUFA1O15239 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFA1O15239 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.7□□□□□ -0.38
NDUFA1O15239 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
NDUFA1O15239 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NDUFA1O15239 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NDUFA1O15239 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
NDUFA1O15239 TSPY6P-201ENST00000448518 926 ntBASIC12.69□□□□□ -0.38
NDUFA1O15239 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.69□□□□□ -0.38
NDUFA1O15239 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.69□□□□□ -0.38
NDUFA1O15239 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms