Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.24□□□□□ -0.13
NDUFA4O00483 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NDUFA4O00483 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.24□□□□□ -0.13
NDUFA4O00483 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NDUFA4O00483 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.23□□□□□ -0.13
NDUFA4O00483 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.23□□□□□ -0.13
NDUFA4O00483 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NDUFA4O00483 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.23□□□□□ -0.13
NDUFA4O00483 KRT8P50-201ENST00000562022 1438 ntBASIC14.23□□□□□ -0.13
NDUFA4O00483 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NDUFA4O00483 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NDUFA4O00483 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA4O00483 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.22□□□□□ -0.13
NDUFA4O00483 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
NDUFA4O00483 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NDUFA4O00483 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NDUFA4O00483 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.22□□□□□ -0.13
NDUFA4O00483 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA4O00483 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA4O00483 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 AC087499.1-201ENST00000418141 1075 ntBASIC14.22□□□□□ -0.13
NDUFA4O00483 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.22□□□□□ -0.13
NDUFA4O00483 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.22□□□□□ -0.13
NDUFA4O00483 ECEL1P2-202ENST00000465689 757 ntBASIC14.22□□□□□ -0.13
NDUFA4O00483 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.22□□□□□ -0.13
NDUFA4O00483 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA4O00483 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
NDUFA4O00483 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NDUFA4O00483 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 AC145285.6-201ENST00000604632 637 ntBASIC14.22□□□□□ -0.13
NDUFA4O00483 AC112497.1-201ENST00000624824 639 ntBASIC14.22□□□□□ -0.13
NDUFA4O00483 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.22□□□□□ -0.13
NDUFA4O00483 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
NDUFA4O00483 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.22□□□□□ -0.13
NDUFA4O00483 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NDUFA4O00483 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.21□□□□□ -0.13
NDUFA4O00483 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NDUFA4O00483 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NDUFA4O00483 AC009113.1-201ENST00000570267 2443 ntBASIC14.21□□□□□ -0.13
NDUFA4O00483 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NDUFA4O00483 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms