Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLIC1O00299 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.52■□□□□ 0.4
CLIC1O00299 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLIC1O00299 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.52■□□□□ 0.4
CLIC1O00299 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLIC1O00299 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.52■□□□□ 0.4
CLIC1O00299 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CLIC1O00299 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLIC1O00299 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.52■□□□□ 0.4
CLIC1O00299 AC006058.3-201ENST00000606217 1069 ntBASIC17.52■□□□□ 0.4
CLIC1O00299 CR392000.1-201ENST00000624770 1228 ntBASIC17.52■□□□□ 0.4
CLIC1O00299 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
CLIC1O00299 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CLIC1O00299 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLIC1O00299 MYLKP1-201ENST00000509077 1580 ntBASIC17.52■□□□□ 0.39
CLIC1O00299 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLIC1O00299 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLIC1O00299 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLIC1O00299 AC008556.1-201ENST00000610908 2040 ntBASIC17.52■□□□□ 0.39
CLIC1O00299 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.52■□□□□ 0.39
CLIC1O00299 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CLIC1O00299 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.52■□□□□ 0.39
CLIC1O00299 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLIC1O00299 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.52■□□□□ 0.39
CLIC1O00299 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLIC1O00299 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.51■□□□□ 0.39
CLIC1O00299 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
CLIC1O00299 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.51■□□□□ 0.39
CLIC1O00299 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.51■□□□□ 0.39
CLIC1O00299 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 AC008040.2-201ENST00000461049 708 ntBASIC17.51■□□□□ 0.39
CLIC1O00299 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLIC1O00299 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.51■□□□□ 0.39
CLIC1O00299 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLIC1O00299 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.51■□□□□ 0.39
CLIC1O00299 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 AC026271.3-201ENST00000571884 352 ntBASIC17.51■□□□□ 0.39
CLIC1O00299 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CLIC1O00299 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 AC130371.2-201ENST00000619443 611 ntBASIC17.51■□□□□ 0.39
CLIC1O00299 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.51■□□□□ 0.39
CLIC1O00299 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLIC1O00299 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CLIC1O00299 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.51■□□□□ 0.39
CLIC1O00299 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
CLIC1O00299 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CLIC1O00299 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 FAM207BP-201ENST00000447172 505 ntBASIC17.5■□□□□ 0.39
CLIC1O00299 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.5■□□□□ 0.39
CLIC1O00299 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.5■□□□□ 0.39
CLIC1O00299 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.5■□□□□ 0.39
CLIC1O00299 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLIC1O00299 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.5■□□□□ 0.39
CLIC1O00299 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLIC1O00299 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC1O00299 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.49■□□□□ 0.39
CLIC1O00299 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC1O00299 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC1O00299 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLIC1O00299 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC1O00299 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC1O00299 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.49■□□□□ 0.39
CLIC1O00299 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms