Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 TEX21P-204ENST00000641479 1693 ntBASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 AC116050.2-201ENST00000612102 1779 ntBASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM238LA0A1B0GVL6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 AC138969.2-201ENST00000532739 9932 ntBASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 AC010326.4-201ENST00000604665 891 ntBASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 IRX1P1-201ENST00000438849 1838 ntBASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 AC135776.1-201ENST00000319817 2481 ntBASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM238LA0A1B0GVL6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 LINC00554-201ENST00000564841 3011 ntBASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 CICP24-201ENST00000605464 2705 ntBASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 LSINCT5-201ENST00000626215 2647 ntBASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 AC013726.1-201ENST00000563747 2285 ntBASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TMEM238LA0A1B0GVL6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms