Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 NBPF21P-201ENST00000425093 1451 ntBASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PRKY-204ENST00000533551 1019 ntBASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC098934.4-201ENST00000564127 592 ntBASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ESPNP-201ENST00000270691 2015 ntBASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC020916.1-201ENST00000587762 1774 ntBASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 UNC93B4-201ENST00000505679 747 ntBASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV3D-20A0A0C4DH25 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms