Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 AC132872.4-202ENST00000622924 2756 ntBASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 LINC00602-201ENST00000629776 2065 ntBASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 IRX1P1-201ENST00000438849 1838 ntBASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 AL499627.2-201ENST00000606283 725 ntBASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS1Q9Y6A9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 AC087741.3-201ENST00000624270 1347 ntBASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 AC138028.4-201ENST00000564984 1845 ntBASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS1Q9Y6A9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
SPCS1Q9Y6A9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms