Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 MIR564-202ENST00000385049 94 ntBASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 AL645929.1-201ENST00000420084 975 ntBASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 MIR3917-201ENST00000580971 93 ntBASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHB2Q9Y5E7 CROCCP3-202ENST00000420820 1947 ntBASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 AC079602.3-201ENST00000623931 403 ntBASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHB2Q9Y5E7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 KRT8P7-201ENST00000533003 1432 ntBASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
PCDHB2Q9Y5E7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 HOXB1-202ENST00000577092 1414 ntBASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHB2Q9Y5E7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 HCG4P8-203ENST00000443049 980 ntBASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 AC104390.1-201ENST00000555663 520 ntBASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHB2Q9Y5E7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms