Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPH3AQ9Y2J0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AL512604.3-201ENST00000569583 964 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AL138966.2-201ENST00000621997 464 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 CR769767.2-201ENST00000622735 460 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AC141257.4-201ENST00000634557 245 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AC136944.6-201ENST00000634818 245 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 AC008556.1-201ENST00000610908 2040 ntBASIC17.02■□□□□ 0.32
RPH3AQ9Y2J0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RPH3AQ9Y2J0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.02■□□□□ 0.31
RPH3AQ9Y2J0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RPH3AQ9Y2J0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RPH3AQ9Y2J0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.02■□□□□ 0.31
RPH3AQ9Y2J0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.02■□□□□ 0.31
RPH3AQ9Y2J0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 AC009947.2-201ENST00000444014 672 ntBASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 DUX4L26-201ENST00000489078 1255 ntBASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RPH3AQ9Y2J0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 AC006333.2-201ENST00000607957 2099 ntBASIC17■□□□□ 0.31
RPH3AQ9Y2J0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17■□□□□ 0.31
RPH3AQ9Y2J0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms