Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 AC092666.2-201ENST00000613287 246 ntBASIC16.58■□□□□ 0.24
COPS3Q9UNS2 AL445675.2-201ENST00000620291 557 ntBASIC16.58■□□□□ 0.24
COPS3Q9UNS2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
COPS3Q9UNS2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AC008764.6-201ENST00000595909 2069 ntBASIC16.57■□□□□ 0.24
COPS3Q9UNS2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AL357033.4-201ENST00000617703 1807 ntBASIC16.57■□□□□ 0.24
COPS3Q9UNS2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 KRT8P3-201ENST00000519669 1449 ntBASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 HLA-L-209ENST00000420110 1011 ntBASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AC004980.1-204ENST00000429707 299 ntBASIC16.57■□□□□ 0.24
COPS3Q9UNS2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AC012313.1-201ENST00000593393 3059 ntBASIC16.57■□□□□ 0.24
COPS3Q9UNS2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.57■□□□□ 0.24
COPS3Q9UNS2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.56■□□□□ 0.24
COPS3Q9UNS2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COPS3Q9UNS2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms