Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RLIMQ9NVW2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 GCSHP5-201ENST00000443090 522 ntBASIC17.33■□□□□ 0.36
RLIMQ9NVW2 CKBP1-201ENST00000565489 1086 ntBASIC17.33■□□□□ 0.36
RLIMQ9NVW2 CD177P1-201ENST00000606252 935 ntBASIC17.33■□□□□ 0.36
RLIMQ9NVW2 MIR6786-201ENST00000616843 113 ntBASIC17.33■□□□□ 0.36
RLIMQ9NVW2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.33■□□□□ 0.36
RLIMQ9NVW2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 MTMR9LP-203ENST00000426597 1545 ntBASIC17.32■□□□□ 0.36
RLIMQ9NVW2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 KRT8P3-201ENST00000519669 1449 ntBASIC17.32■□□□□ 0.36
RLIMQ9NVW2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 MESTP1-201ENST00000404287 994 ntBASIC17.32■□□□□ 0.36
RLIMQ9NVW2 FAM207BP-201ENST00000447172 505 ntBASIC17.32■□□□□ 0.36
RLIMQ9NVW2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 AC068587.9-201ENST00000641814 219 ntBASIC17.32■□□□□ 0.36
RLIMQ9NVW2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RLIMQ9NVW2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 KRT8P32-201ENST00000512863 1461 ntBASIC17.31■□□□□ 0.36
RLIMQ9NVW2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RLIMQ9NVW2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 AL135905.2-201ENST00000584934 1404 ntBASIC17.3■□□□□ 0.36
RLIMQ9NVW2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RLIMQ9NVW2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms