Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.54□□□□□ -0.88
CDC42SE1Q9NRR8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
CDC42SE1Q9NRR8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
CDC42SE1Q9NRR8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 AL359183.1-201ENST00000623796 2132 ntBASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
CDC42SE1Q9NRR8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms