Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 LETM1P2-201ENST00000597330 2178 ntBASIC16.57■□□□□ 0.24
NELFAQ9H3P2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.57■□□□□ 0.24
NELFAQ9H3P2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 CCR12P-201ENST00000446203 998 ntBASIC16.56■□□□□ 0.24
NELFAQ9H3P2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 MIR4674-201ENST00000582457 87 ntBASIC16.56■□□□□ 0.24
NELFAQ9H3P2 AC116562.4-202ENST00000641738 218 ntBASIC16.56■□□□□ 0.24
NELFAQ9H3P2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.56■□□□□ 0.24
NELFAQ9H3P2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 TSPY17P-201ENST00000450329 467 ntBASIC16.55■□□□□ 0.24
NELFAQ9H3P2 ECEL1P2-202ENST00000465689 757 ntBASIC16.55■□□□□ 0.24
NELFAQ9H3P2 AP003041.3-201ENST00000527151 707 ntBASIC16.55■□□□□ 0.24
NELFAQ9H3P2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 LINC01023-201ENST00000606054 436 ntBASIC16.55■□□□□ 0.24
NELFAQ9H3P2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NELFAQ9H3P2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.54■□□□□ 0.24
NELFAQ9H3P2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.54■□□□□ 0.24
NELFAQ9H3P2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 AC010653.2-201ENST00000623505 997 ntBASIC16.54■□□□□ 0.24
NELFAQ9H3P2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 RCC2P3-201ENST00000418112 1537 ntBASIC16.54■□□□□ 0.24
NELFAQ9H3P2 MTMR9LP-203ENST00000426597 1545 ntBASIC16.54■□□□□ 0.24
NELFAQ9H3P2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
NELFAQ9H3P2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms