Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.71■□□□□ 0.43
VCX3BQ9H321 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VCX3BQ9H321 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.71■□□□□ 0.43
VCX3BQ9H321 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.71■□□□□ 0.43
VCX3BQ9H321 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VCX3BQ9H321 CICP6-201ENST00000457191 2729 ntBASIC17.71■□□□□ 0.42
VCX3BQ9H321 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 IRS3P-201ENST00000223076 1006 ntBASIC17.7■□□□□ 0.42
VCX3BQ9H321 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.7■□□□□ 0.42
VCX3BQ9H321 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VCX3BQ9H321 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 AL596257.1-201ENST00000641463 2694 ntBASIC17.69■□□□□ 0.42
VCX3BQ9H321 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 NKILA-202ENST00000614771 2598 ntBASIC17.69■□□□□ 0.42
VCX3BQ9H321 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 MYC-208ENST00000641036 567 ntBASIC17.69■□□□□ 0.42
VCX3BQ9H321 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 AC019069.1-201ENST00000610008 1333 ntBASIC17.69■□□□□ 0.42
VCX3BQ9H321 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.69■□□□□ 0.42
VCX3BQ9H321 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VCX3BQ9H321 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms