Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 MTMR9LP-203ENST00000426597 1545 ntBASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 AC112777.1-201ENST00000540175 1423 ntBASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD4Q9H0A8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 AC068587.9-201ENST00000641814 219 ntBASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 KRT8P41-201ENST00000533985 1514 ntBASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD4Q9H0A8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.42■□□□□ 0.22
COMMD4Q9H0A8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 AL499627.1-201ENST00000569373 2188 ntBASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COMMD4Q9H0A8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms