Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTDSP1Q9GZU7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CTDSP1Q9GZU7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CTDSP1Q9GZU7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 KRT87P-202ENST00000534226 1464 ntBASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 AC010141.2-201ENST00000452426 721 ntBASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.33□□□□□ -0.12
CTDSP1Q9GZU7 FLJ16779-201ENST00000612722 7638 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms