Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 AL356309.3-201ENST00000624132 1934 ntBASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 AL137060.1-201ENST00000618151 2648 ntBASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 KRT8P32-201ENST00000512863 1461 ntBASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 BCRP1-201ENST00000444246 691 ntBASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.48□□□□□ -0.41
ALMS1Q8TCU4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AC125634.1-201ENST00000438758 1403 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AC108751.1-201ENST00000490852 363 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 MIR4469-201ENST00000583919 79 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AC073314.1-201ENST00000568729 2216 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AC020907.5-201ENST00000624372 1936 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 MCCD1P2-201ENST00000423228 335 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AC040169.1-201ENST00000565382 521 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 AC064836.3-201ENST00000607928 673 ntBASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ALMS1Q8TCU4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 Z82202.1-201ENST00000623446 1880 ntBASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms