Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 KRT18P41-201ENST00000518924 1277 ntBASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 AC112777.1-201ENST00000540175 1423 ntBASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 AC007613.1-201ENST00000572811 2597 ntBASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCC2Q8TAQ2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 AL023284.2-201ENST00000405850 579 ntBASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 AP003041.3-201ENST00000527151 707 ntBASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCC2Q8TAQ2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCC2Q8TAQ2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 AC073508.3-201ENST00000619697 1419 ntBASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 GPAT2P1-201ENST00000444924 1672 ntBASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCC2Q8TAQ2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms