Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 AC124283.5-201ENST00000624661 1809 ntBASIC16.06■□□□□ 0.16
BEST4Q8NFU0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.06■□□□□ 0.16
BEST4Q8NFU0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 AC083906.6-201ENST00000641366 219 ntBASIC16.06■□□□□ 0.16
BEST4Q8NFU0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BEST4Q8NFU0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BEST4Q8NFU0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 RPS2P52-201ENST00000469610 820 ntBASIC16.04■□□□□ 0.16
BEST4Q8NFU0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 AC133552.2-202ENST00000575694 574 ntBASIC16.04■□□□□ 0.16
BEST4Q8NFU0 RAP2CP1-201ENST00000605103 478 ntBASIC16.04■□□□□ 0.16
BEST4Q8NFU0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 AC141586.5-201ENST00000624546 2050 ntBASIC16.04■□□□□ 0.16
BEST4Q8NFU0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST4Q8NFU0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST4Q8NFU0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST4Q8NFU0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms