Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.3■□□□□ 0.68
CCDC89Q8N998 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 RPS2P4-201ENST00000476944 856 ntBASIC19.3■□□□□ 0.68
CCDC89Q8N998 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 KRT8P3-201ENST00000519669 1449 ntBASIC19.3■□□□□ 0.68
CCDC89Q8N998 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 KRT16P1-201ENST00000399124 1418 ntBASIC19.29■□□□□ 0.68
CCDC89Q8N998 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 AC004951.3-201ENST00000418645 1148 ntBASIC19.29■□□□□ 0.68
CCDC89Q8N998 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 AC091390.4-202ENST00000476426 537 ntBASIC19.29■□□□□ 0.68
CCDC89Q8N998 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 C1QBPP2-201ENST00000528754 825 ntBASIC19.29■□□□□ 0.68
CCDC89Q8N998 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC89Q8N998 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC89Q8N998 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 AC112777.1-201ENST00000540175 1423 ntBASIC19.28■□□□□ 0.68
CCDC89Q8N998 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 AC128676.1-201ENST00000454392 318 ntBASIC19.28■□□□□ 0.68
CCDC89Q8N998 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC89Q8N998 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC89Q8N998 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms