Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC00346Q8IVM7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 MFAP1P1-201ENST00000442257 1255 ntBASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 AC008622.2-201ENST00000617006 1229 ntBASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 AL049637.2-201ENST00000641778 930 ntBASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC00346Q8IVM7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.46■□□□□ 0.22
LINC00346Q8IVM7 AL354751.1-201ENST00000412768 1863 ntBASIC16.46■□□□□ 0.22
LINC00346Q8IVM7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.46■□□□□ 0.22
LINC00346Q8IVM7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.46■□□□□ 0.22
LINC00346Q8IVM7 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 AC008556.1-201ENST00000610908 2040 ntBASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 AC012618.2-201ENST00000428058 849 ntBASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LINC00346Q8IVM7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms