Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 AC008687.6-201ENST00000596318 630 ntBASIC17.91■□□□□ 0.46
RNF220Q5VTB9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 ZNF815P-204ENST00000434898 1737 ntBASIC17.91■□□□□ 0.46
RNF220Q5VTB9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF220Q5VTB9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF220Q5VTB9 KRT8P8-201ENST00000434750 1448 ntBASIC17.89■□□□□ 0.46
RNF220Q5VTB9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RNF220Q5VTB9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RNF220Q5VTB9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 GNAS-203ENST00000306120 1878 ntBASIC17.89■□□□□ 0.45
RNF220Q5VTB9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 HCG11-201ENST00000411553 5696 ntBASIC17.89■□□□□ 0.45
RNF220Q5VTB9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF220Q5VTB9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF220Q5VTB9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms