Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS4XP62701 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RPS4XP62701 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPS4XP62701 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 AC005521.1-201ENST00000393351 872 ntBASIC16.79■□□□□ 0.28
RPS4XP62701 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS4XP62701 AL390955.1-201ENST00000428694 934 ntBASIC16.79■□□□□ 0.28
RPS4XP62701 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RPS4XP62701 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS4XP62701 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPS4XP62701 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 AC008556.1-201ENST00000610908 2040 ntBASIC16.79■□□□□ 0.28
RPS4XP62701 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS4XP62701 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS4XP62701 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RPS4XP62701 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 ARMC10P1-201ENST00000313754 855 ntBASIC16.78■□□□□ 0.28
RPS4XP62701 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RPS4XP62701 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.78■□□□□ 0.28
RPS4XP62701 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
RPS4XP62701 AL137013.1-201ENST00000432946 1228 ntBASIC16.78■□□□□ 0.28
RPS4XP62701 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4XP62701 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS4XP62701 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.78■□□□□ 0.28
RPS4XP62701 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
RPS4XP62701 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS4XP62701 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS4XP62701 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4XP62701 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.77■□□□□ 0.28
RPS4XP62701 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RPS4XP62701 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.77■□□□□ 0.28
RPS4XP62701 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4XP62701 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4XP62701 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4XP62701 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4XP62701 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4XP62701 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4XP62701 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS4XP62701 MFAP1P1-201ENST00000442257 1255 ntBASIC16.77■□□□□ 0.28
RPS4XP62701 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS4XP62701 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS4XP62701 KRT18P35-201ENST00000510488 1269 ntBASIC16.77■□□□□ 0.28
RPS4XP62701 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4XP62701 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS4XP62701 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4XP62701 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.77■□□□□ 0.28
RPS4XP62701 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RPS4XP62701 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.77■□□□□ 0.28
RPS4XP62701 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.77■□□□□ 0.27
RPS4XP62701 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms