Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXG1P55316 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FOXG1P55316 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FOXG1P55316 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXG1P55316 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 AL031133.1-201ENST00000406807 723 ntBASIC16.28■□□□□ 0.2
FOXG1P55316 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXG1P55316 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXG1P55316 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXG1P55316 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXG1P55316 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXG1P55316 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXG1P55316 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXG1P55316 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXG1P55316 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXG1P55316 KRT8P7-201ENST00000533003 1432 ntBASIC16.28■□□□□ 0.2
FOXG1P55316 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXG1P55316 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXG1P55316 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXG1P55316 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXG1P55316 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXG1P55316 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXG1P55316 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXG1P55316 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXG1P55316 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXG1P55316 AC087388.1-201ENST00000571370 1112 ntBASIC16.27■□□□□ 0.2
FOXG1P55316 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXG1P55316 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
FOXG1P55316 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXG1P55316 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXG1P55316 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
FOXG1P55316 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXG1P55316 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXG1P55316 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FOXG1P55316 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXG1P55316 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.27■□□□□ 0.19
FOXG1P55316 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXG1P55316 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.27■□□□□ 0.19
FOXG1P55316 AC126763.1-201ENST00000552015 2118 ntBASIC16.27■□□□□ 0.19
FOXG1P55316 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
FOXG1P55316 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXG1P55316 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FOXG1P55316 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
FOXG1P55316 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXG1P55316 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXG1P55316 AL671277.2-201ENST00000458060 996 ntBASIC16.26■□□□□ 0.19
FOXG1P55316 KRT18P41-201ENST00000518924 1277 ntBASIC16.26■□□□□ 0.19
FOXG1P55316 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 AC083849.1-201ENST00000615227 514 ntBASIC16.26■□□□□ 0.19
FOXG1P55316 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.26■□□□□ 0.19
FOXG1P55316 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXG1P55316 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXG1P55316 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXG1P55316 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 SPDYE13P-201ENST00000445314 798 ntBASIC16.25■□□□□ 0.19
FOXG1P55316 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXG1P55316 LINC01238-205ENST00000567549 1107 ntBASIC16.25■□□□□ 0.19
FOXG1P55316 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.25■□□□□ 0.19
FOXG1P55316 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
FOXG1P55316 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXG1P55316 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FOXG1P55316 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FOXG1P55316 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FOXG1P55316 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.25■□□□□ 0.19
FOXG1P55316 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FOXG1P55316 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXG1P55316 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms