Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH8P55286 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH8P55286 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDH8P55286 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH8P55286 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH8P55286 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH8P55286 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDH8P55286 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH8P55286 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH8P55286 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 AL359075.1-203ENST00000462729 1002 ntBASIC19.8■□□□□ 0.76
CDH8P55286 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.8■□□□□ 0.76
CDH8P55286 AC022616.7-201ENST00000525383 220 ntBASIC19.8■□□□□ 0.76
CDH8P55286 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.8■□□□□ 0.76
CDH8P55286 AC010240.3-201ENST00000607688 395 ntBASIC19.8■□□□□ 0.76
CDH8P55286 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDH8P55286 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH8P55286 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH8P55286 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 WIZP1-201ENST00000531444 2299 ntBASIC19.79■□□□□ 0.76
CDH8P55286 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH8P55286 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH8P55286 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH8P55286 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH8P55286 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 SPDYE15P-201ENST00000424157 909 ntBASIC19.79■□□□□ 0.76
CDH8P55286 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.79■□□□□ 0.76
CDH8P55286 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDH8P55286 NTF6B-201ENST00000591913 560 ntBASIC19.79■□□□□ 0.76
CDH8P55286 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH8P55286 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CDH8P55286 AL157888.1-201ENST00000631930 593 ntBASIC19.79■□□□□ 0.76
CDH8P55286 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
CDH8P55286 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDH8P55286 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH8P55286 MYLKP1-201ENST00000509077 1580 ntBASIC19.78■□□□□ 0.76
CDH8P55286 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH8P55286 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH8P55286 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 AC112777.1-201ENST00000540175 1423 ntBASIC19.78■□□□□ 0.76
CDH8P55286 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDH8P55286 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDH8P55286 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH8P55286 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH8P55286 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH8P55286 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDH8P55286 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH8P55286 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH8P55286 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH8P55286 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms