Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SLC25A1P53007 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SLC25A1P53007 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
SLC25A1P53007 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC25A1P53007 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC25A1P53007 AL023284.2-201ENST00000405850 579 ntBASIC16.52■□□□□ 0.24
SLC25A1P53007 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SLC25A1P53007 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.52■□□□□ 0.24
SLC25A1P53007 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC25A1P53007 DGCR10-201ENST00000609839 495 ntBASIC16.52■□□□□ 0.24
SLC25A1P53007 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC25A1P53007 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC25A1P53007 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC25A1P53007 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC25A1P53007 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.52■□□□□ 0.24
SLC25A1P53007 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SLC25A1P53007 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.52■□□□□ 0.24
SLC25A1P53007 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC25A1P53007 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SLC25A1P53007 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC25A1P53007 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.52■□□□□ 0.23
SLC25A1P53007 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
SLC25A1P53007 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
SLC25A1P53007 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC25A1P53007 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC25A1P53007 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC25A1P53007 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SLC25A1P53007 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SLC25A1P53007 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC25A1P53007 PCDHB18P-201ENST00000524813 2368 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC25A1P53007 AC005332.8-201ENST00000622750 2735 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC25A1P53007 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC25A1P53007 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SLC25A1P53007 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC25A1P53007 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC25A1P53007 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC25A1P53007 MCCD1P1-208ENST00000445732 328 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 MIR4651-201ENST00000582622 73 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 AL359736.2-201ENST00000621992 437 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC25A1P53007 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC25A1P53007 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.51■□□□□ 0.23
SLC25A1P53007 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SLC25A1P53007 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC25A1P53007 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 ESPNP-201ENST00000270691 2015 ntBASIC16.5■□□□□ 0.23
SLC25A1P53007 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 FAM197Y1-201ENST00000421178 764 ntBASIC16.5■□□□□ 0.23
SLC25A1P53007 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC25A1P53007 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC25A1P53007 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC25A1P53007 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms