Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.34■□□□□ 0.69
MMP13P45452 CRYGFP-201ENST00000418459 633 ntBASIC19.34■□□□□ 0.69
MMP13P45452 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.34■□□□□ 0.69
MMP13P45452 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.34■□□□□ 0.69
MMP13P45452 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
MMP13P45452 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP13P45452 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MMP13P45452 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MMP13P45452 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP13P45452 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MMP13P45452 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MMP13P45452 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP13P45452 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
MMP13P45452 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.33■□□□□ 0.69
MMP13P45452 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.33■□□□□ 0.69
MMP13P45452 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
MMP13P45452 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.33■□□□□ 0.69
MMP13P45452 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
MMP13P45452 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP13P45452 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP13P45452 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP13P45452 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP13P45452 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.33■□□□□ 0.68
MMP13P45452 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP13P45452 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.33■□□□□ 0.68
MMP13P45452 AP000525.1-201ENST00000608286 694 ntBASIC19.33■□□□□ 0.68
MMP13P45452 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP13P45452 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP13P45452 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.33■□□□□ 0.68
MMP13P45452 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
MMP13P45452 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.33■□□□□ 0.68
MMP13P45452 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP13P45452 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MMP13P45452 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MMP13P45452 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
MMP13P45452 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
MMP13P45452 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
MMP13P45452 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.32■□□□□ 0.68
MMP13P45452 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP13P45452 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP13P45452 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP13P45452 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.32■□□□□ 0.68
MMP13P45452 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP13P45452 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
MMP13P45452 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MMP13P45452 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.31■□□□□ 0.68
MMP13P45452 TSPY15P-201ENST00000457163 923 ntBASIC19.31■□□□□ 0.68
MMP13P45452 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 AP005242.2-201ENST00000580065 1175 ntBASIC19.31■□□□□ 0.68
MMP13P45452 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.31■□□□□ 0.68
MMP13P45452 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.31■□□□□ 0.68
MMP13P45452 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP13P45452 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MMP13P45452 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
MMP13P45452 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP13P45452 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP13P45452 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 AC008764.6-201ENST00000595909 2069 ntBASIC19.3■□□□□ 0.68
MMP13P45452 MIR1238-201ENST00000408483 83 ntBASIC19.3■□□□□ 0.68
MMP13P45452 AL390955.1-201ENST00000428694 934 ntBASIC19.3■□□□□ 0.68
MMP13P45452 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP13P45452 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms