Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRPHP41219 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRPHP41219 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.97■□□□□ 0.95
PRPHP41219 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPHP41219 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPHP41219 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPHP41219 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPHP41219 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.97■□□□□ 0.95
PRPHP41219 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.97■□□□□ 0.95
PRPHP41219 AC073912.3-201ENST00000624414 853 ntBASIC20.97■□□□□ 0.95
PRPHP41219 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.97■□□□□ 0.95
PRPHP41219 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.97■□□□□ 0.95
PRPHP41219 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.97■□□□□ 0.95
PRPHP41219 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRPHP41219 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPHP41219 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRPHP41219 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.96■□□□□ 0.95
PRPHP41219 KRT18P23-201ENST00000435622 1283 ntBASIC20.96■□□□□ 0.95
PRPHP41219 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.96■□□□□ 0.95
PRPHP41219 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPHP41219 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRPHP41219 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
PRPHP41219 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.96■□□□□ 0.95
PRPHP41219 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPHP41219 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPHP41219 AC012306.2-201ENST00000609350 630 ntBASIC20.96■□□□□ 0.95
PRPHP41219 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PRPHP41219 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PRPHP41219 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPHP41219 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.96■□□□□ 0.95
PRPHP41219 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRPHP41219 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PRPHP41219 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
PRPHP41219 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PRPHP41219 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPHP41219 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPHP41219 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PRPHP41219 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.95■□□□□ 0.94
PRPHP41219 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRPHP41219 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.94■□□□□ 0.94
PRPHP41219 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPHP41219 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
PRPHP41219 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PRPHP41219 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.94■□□□□ 0.94
PRPHP41219 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.94■□□□□ 0.94
PRPHP41219 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PRPHP41219 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
PRPHP41219 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
PRPHP41219 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRPHP41219 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms