Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.57■□□□□ 0.72
PCK1P35558 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCK1P35558 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCK1P35558 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCK1P35558 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCK1P35558 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCK1P35558 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCK1P35558 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.57■□□□□ 0.72
PCK1P35558 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 AL357033.4-201ENST00000617703 1807 ntBASIC19.56■□□□□ 0.72
PCK1P35558 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.56■□□□□ 0.72
PCK1P35558 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.56■□□□□ 0.72
PCK1P35558 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.56■□□□□ 0.72
PCK1P35558 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 AC008622.2-201ENST00000617006 1229 ntBASIC19.56■□□□□ 0.72
PCK1P35558 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.56■□□□□ 0.72
PCK1P35558 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.56■□□□□ 0.72
PCK1P35558 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCK1P35558 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.55■□□□□ 0.72
PCK1P35558 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCK1P35558 CRYGFP-201ENST00000418459 633 ntBASIC19.55■□□□□ 0.72
PCK1P35558 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.55■□□□□ 0.72
PCK1P35558 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.55■□□□□ 0.72
PCK1P35558 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.55■□□□□ 0.72
PCK1P35558 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 AC090164.3-201ENST00000610780 2143 ntBASIC19.55■□□□□ 0.72
PCK1P35558 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.55■□□□□ 0.72
PCK1P35558 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PCK1P35558 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCK1P35558 BCL2-203ENST00000589955 5011 ntBASIC19.54■□□□□ 0.72
PCK1P35558 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCK1P35558 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.54■□□□□ 0.72
PCK1P35558 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.54■□□□□ 0.72
PCK1P35558 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 UNC93B2-201ENST00000285383 730 ntBASIC19.54■□□□□ 0.72
PCK1P35558 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 TSPY7P-201ENST00000431358 1114 ntBASIC19.54■□□□□ 0.72
PCK1P35558 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCK1P35558 RBM17P1-201ENST00000453646 1190 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms