Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.06■□□□□ 0.64
SLC6A4P31645 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC6A4P31645 MIR3180-4-201ENST00000582223 153 ntBASIC19.06■□□□□ 0.64
SLC6A4P31645 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.06■□□□□ 0.64
SLC6A4P31645 AC091076.1-201ENST00000610741 619 ntBASIC19.06■□□□□ 0.64
SLC6A4P31645 AP000550.4-202ENST00000639755 178 ntBASIC19.06■□□□□ 0.64
SLC6A4P31645 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A4P31645 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 AC093525.10-201ENST00000625130 1569 ntBASIC19.06■□□□□ 0.64
SLC6A4P31645 IER3-202ENST00000376377 1350 ntBASIC19.06■□□□□ 0.64
SLC6A4P31645 CROCCP3-202ENST00000420820 1947 ntBASIC19.06■□□□□ 0.64
SLC6A4P31645 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A4P31645 ANO7L1-203ENST00000602586 1720 ntBASIC19.05■□□□□ 0.64
SLC6A4P31645 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SLC6A4P31645 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SLC6A4P31645 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
SLC6A4P31645 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC6A4P31645 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A4P31645 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SLC6A4P31645 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.05■□□□□ 0.64
SLC6A4P31645 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC6A4P31645 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.05■□□□□ 0.64
SLC6A4P31645 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SLC6A4P31645 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC6A4P31645 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.04■□□□□ 0.64
SLC6A4P31645 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC6A4P31645 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A4P31645 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SLC6A4P31645 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 AP000593.1-201ENST00000393668 712 ntBASIC19.04■□□□□ 0.64
SLC6A4P31645 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC6A4P31645 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.04■□□□□ 0.64
SLC6A4P31645 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SLC6A4P31645 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC6A4P31645 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.04■□□□□ 0.64
SLC6A4P31645 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC6A4P31645 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.04■□□□□ 0.64
SLC6A4P31645 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.04■□□□□ 0.64
SLC6A4P31645 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 AL163051.1-201ENST00000569214 1512 ntBASIC19.04■□□□□ 0.64
SLC6A4P31645 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SLC6A4P31645 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A4P31645 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SLC6A4P31645 AC098818.2-201ENST00000564925 2320 ntBASIC19.03■□□□□ 0.64
SLC6A4P31645 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A4P31645 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A4P31645 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A4P31645 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A4P31645 PVRIG2P-201ENST00000435460 978 ntBASIC19.03■□□□□ 0.64
SLC6A4P31645 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.03■□□□□ 0.64
SLC6A4P31645 AL031598.1-201ENST00000561511 1773 ntBASIC19.03■□□□□ 0.64
SLC6A4P31645 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SLC6A4P31645 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A4P31645 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SLC6A4P31645 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
SLC6A4P31645 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A4P31645 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SLC6A4P31645 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A4P31645 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A4P31645 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SLC6A4P31645 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A4P31645 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A4P31645 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC6A4P31645 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A4P31645 AL645929.1-201ENST00000420084 975 ntBASIC19.02■□□□□ 0.64
SLC6A4P31645 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A4P31645 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SLC6A4P31645 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC6A4P31645 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC6A4P31645 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A4P31645 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC6A4P31645 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
SLC6A4P31645 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC6A4P31645 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC6A4P31645 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms