Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.85■□□□□ 0.29
GDF1P27539 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.85■□□□□ 0.29
GDF1P27539 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.85■□□□□ 0.29
GDF1P27539 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
GDF1P27539 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.85■□□□□ 0.29
GDF1P27539 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.85■□□□□ 0.29
GDF1P27539 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.85■□□□□ 0.29
GDF1P27539 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.85■□□□□ 0.29
GDF1P27539 AP000550.4-202ENST00000639755 178 ntBASIC16.85■□□□□ 0.29
GDF1P27539 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
GDF1P27539 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
GDF1P27539 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 MTMR9LP-203ENST00000426597 1545 ntBASIC16.85■□□□□ 0.29
GDF1P27539 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF1P27539 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
GDF1P27539 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF1P27539 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 AC020763.4-201ENST00000623414 4170 ntBASIC16.84■□□□□ 0.29
GDF1P27539 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
GDF1P27539 AC092597.1-201ENST00000487352 616 ntBASIC16.84■□□□□ 0.29
GDF1P27539 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
GDF1P27539 HYMAI.1-201ENST00000620949 238 ntBASIC16.84■□□□□ 0.29
GDF1P27539 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.84■□□□□ 0.29
GDF1P27539 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.84■□□□□ 0.29
GDF1P27539 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 IER3-202ENST00000376377 1350 ntBASIC16.84■□□□□ 0.29
GDF1P27539 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF1P27539 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF1P27539 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.84■□□□□ 0.29
GDF1P27539 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.84■□□□□ 0.29
GDF1P27539 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
GDF1P27539 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDF1P27539 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
GDF1P27539 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.83■□□□□ 0.29
GDF1P27539 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 HBZP1-201ENST00000354915 429 ntBASIC16.83■□□□□ 0.28
GDF1P27539 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.83■□□□□ 0.28
GDF1P27539 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GDF1P27539 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GDF1P27539 UPK3BP1-201ENST00000428678 509 ntBASIC16.83■□□□□ 0.28
GDF1P27539 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.83■□□□□ 0.28
GDF1P27539 AC005332.1-201ENST00000577698 1310 ntBASIC16.83■□□□□ 0.28
GDF1P27539 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GDF1P27539 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GDF1P27539 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GDF1P27539 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
GDF1P27539 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF1P27539 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.82■□□□□ 0.28
GDF1P27539 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF1P27539 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.82■□□□□ 0.28
GDF1P27539 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GDF1P27539 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.82■□□□□ 0.28
GDF1P27539 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms