Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNTFP26441 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNTFP26441 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.58■□□□□ 0.56
CNTFP26441 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNTFP26441 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNTFP26441 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTFP26441 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTFP26441 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNTFP26441 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 AP000593.1-201ENST00000393668 712 ntBASIC18.57■□□□□ 0.56
CNTFP26441 AP002982.1-201ENST00000492365 877 ntBASIC18.57■□□□□ 0.56
CNTFP26441 CKBP1-201ENST00000565489 1086 ntBASIC18.57■□□□□ 0.56
CNTFP26441 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTFP26441 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTFP26441 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
CNTFP26441 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CNTFP26441 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTFP26441 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CNTFP26441 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CNTFP26441 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTFP26441 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CNTFP26441 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 RNA5SP413-201ENST00000516373 109 ntBASIC18.56■□□□□ 0.56
CNTFP26441 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.56■□□□□ 0.56
CNTFP26441 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CNTFP26441 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTFP26441 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTFP26441 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTFP26441 FLJ13224-201ENST00000313737 1514 ntBASIC18.55■□□□□ 0.56
CNTFP26441 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CNTFP26441 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTFP26441 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CNTFP26441 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTFP26441 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CNTFP26441 AL353807.1-201ENST00000427475 662 ntBASIC18.55■□□□□ 0.56
CNTFP26441 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.55■□□□□ 0.56
CNTFP26441 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CNTFP26441 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTFP26441 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTFP26441 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.55■□□□□ 0.56
CNTFP26441 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.55■□□□□ 0.56
CNTFP26441 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CNTFP26441 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.55■□□□□ 0.56
CNTFP26441 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTFP26441 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTFP26441 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CNTFP26441 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTFP26441 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CNTFP26441 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTFP26441 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms