Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.43■□□□□ 0.22
MSR1P21757 AC073592.3-201ENST00000625118 1834 ntBASIC16.43■□□□□ 0.22
MSR1P21757 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MSR1P21757 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MSR1P21757 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 MIR1238-201ENST00000408483 83 ntBASIC16.43■□□□□ 0.22
MSR1P21757 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.43■□□□□ 0.22
MSR1P21757 AL355075.4-201ENST00000554988 638 ntBASIC16.43■□□□□ 0.22
MSR1P21757 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MSR1P21757 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.43■□□□□ 0.22
MSR1P21757 KRT8P45-201ENST00000414328 1447 ntBASIC16.43■□□□□ 0.22
MSR1P21757 AC104581.1-202ENST00000635932 2618 ntBASIC16.43■□□□□ 0.22
MSR1P21757 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.43■□□□□ 0.22
MSR1P21757 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MSR1P21757 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MSR1P21757 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.43■□□□□ 0.22
MSR1P21757 AC009113.1-201ENST00000570267 2443 ntBASIC16.43■□□□□ 0.22
MSR1P21757 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MSR1P21757 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.42■□□□□ 0.22
MSR1P21757 AC126763.1-201ENST00000552015 2118 ntBASIC16.42■□□□□ 0.22
MSR1P21757 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.42■□□□□ 0.22
MSR1P21757 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.42■□□□□ 0.22
MSR1P21757 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.42■□□□□ 0.22
MSR1P21757 AL390955.1-201ENST00000428694 934 ntBASIC16.42■□□□□ 0.22
MSR1P21757 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 CCR12P-201ENST00000446203 998 ntBASIC16.42■□□□□ 0.22
MSR1P21757 TSPY17P-201ENST00000450329 467 ntBASIC16.42■□□□□ 0.22
MSR1P21757 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 C2orf69P3-201ENST00000565542 1120 ntBASIC16.42■□□□□ 0.22
MSR1P21757 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.42■□□□□ 0.22
MSR1P21757 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.42■□□□□ 0.22
MSR1P21757 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
MSR1P21757 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.42■□□□□ 0.22
MSR1P21757 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.42■□□□□ 0.22
MSR1P21757 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MSR1P21757 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MSR1P21757 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.42■□□□□ 0.22
MSR1P21757 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
MSR1P21757 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MSR1P21757 AL499627.1-201ENST00000569373 2188 ntBASIC16.41■□□□□ 0.22
MSR1P21757 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.41■□□□□ 0.22
MSR1P21757 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.41■□□□□ 0.22
MSR1P21757 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MSR1P21757 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.41■□□□□ 0.22
MSR1P21757 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 MIR564-202ENST00000385049 94 ntBASIC16.41■□□□□ 0.22
MSR1P21757 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.41■□□□□ 0.22
MSR1P21757 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.41■□□□□ 0.22
MSR1P21757 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.41■□□□□ 0.22
MSR1P21757 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.41■□□□□ 0.22
MSR1P21757 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.41■□□□□ 0.22
MSR1P21757 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.41■□□□□ 0.22
MSR1P21757 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.41■□□□□ 0.22
MSR1P21757 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MSR1P21757 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSR1P21757 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MSR1P21757 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSR1P21757 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MSR1P21757 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MSR1P21757 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MSR1P21757 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms